Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdkl5Q3UTQ8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkl5Q3UTQ8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdkl5Q3UTQ8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Cdkl5Q3UTQ8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Gm15375-201ENSMUST00000119510 849 ntBASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Gm13158-201ENSMUST00000122007 736 ntBASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Gm27275-201ENSMUST00000184318 272 ntBASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdkl5Q3UTQ8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cdkl5Q3UTQ8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdkl5Q3UTQ8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cdkl5Q3UTQ8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 Gm11643-201ENSMUST00000119578 864 ntBASIC20.46■□□□□ 0.87
Cdkl5Q3UTQ8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms