Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Timm23-208ENSMUST00000226683 750 ntBASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smcr8Q3UMB5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smcr8Q3UMB5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smcr8Q3UMB5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smcr8Q3UMB5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Gm38308-201ENSMUST00000194934 1809 ntBASIC19■□□□□ 0.63
Smcr8Q3UMB5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19■□□□□ 0.63
Smcr8Q3UMB5 Gm11643-201ENSMUST00000119578 864 ntBASIC19■□□□□ 0.63
Smcr8Q3UMB5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Otx2os1-204ENSMUST00000227221 751 ntBASIC19■□□□□ 0.63
Smcr8Q3UMB5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Gm5953-201ENSMUST00000220644 2616 ntBASIC19■□□□□ 0.63
Smcr8Q3UMB5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smcr8Q3UMB5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Gm6433-201ENSMUST00000118634 875 ntBASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Odf3b-204ENSMUST00000227834 930 ntBASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smcr8Q3UMB5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smcr8Q3UMB5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smcr8Q3UMB5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Gm3375-201ENSMUST00000203929 796 ntBASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms