Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shcbp1lQ3TTP0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.84■□□□□ 0.45
Shcbp1lQ3TTP0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shcbp1lQ3TTP0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shcbp1lQ3TTP0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shcbp1lQ3TTP0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shcbp1lQ3TTP0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Shcbp1lQ3TTP0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shcbp1lQ3TTP0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Mir2861-201ENSMUST00000175539 82 ntBASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shcbp1lQ3TTP0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Shcbp1lQ3TTP0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shcbp1lQ3TTP0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.79■□□□□ 0.44
Shcbp1lQ3TTP0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms