Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Shox2P70390 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Shox2P70390 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Shox2P70390 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.53■□□□□ 0.4
Shox2P70390 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.53■□□□□ 0.4
Shox2P70390 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shox2P70390 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.53■□□□□ 0.4
Shox2P70390 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.53■□□□□ 0.4
Shox2P70390 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shox2P70390 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Shox2P70390 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 Gm11421-201ENSMUST00000122124 294 ntBASIC17.52■□□□□ 0.4
Shox2P70390 Gm38205-201ENSMUST00000192243 258 ntBASIC17.52■□□□□ 0.4
Shox2P70390 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.52■□□□□ 0.4
Shox2P70390 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shox2P70390 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shox2P70390 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shox2P70390 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shox2P70390 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
Shox2P70390 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shox2P70390 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shox2P70390 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shox2P70390 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Shox2P70390 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Gm12251-201ENSMUST00000117893 792 ntBASIC17.51■□□□□ 0.39
Shox2P70390 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shox2P70390 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Shox2P70390 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.51■□□□□ 0.39
Shox2P70390 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Shox2P70390 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shox2P70390 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Shox2P70390 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.5■□□□□ 0.39
Shox2P70390 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.5■□□□□ 0.39
Shox2P70390 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.5■□□□□ 0.39
Shox2P70390 Gm15820-201ENSMUST00000201566 728 ntBASIC17.5■□□□□ 0.39
Shox2P70390 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Shox2P70390 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Shox2P70390 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shox2P70390 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Shox2P70390 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shox2P70390 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Mir8112-201ENSMUST00000184382 131 ntBASIC17.49■□□□□ 0.39
Shox2P70390 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shox2P70390 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.49■□□□□ 0.39
Shox2P70390 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Shox2P70390 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.48■□□□□ 0.39
Shox2P70390 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.48■□□□□ 0.39
Shox2P70390 Gm22325-201ENSMUST00000158904 308 ntBASIC17.48■□□□□ 0.39
Shox2P70390 Smad6-203ENSMUST00000179458 273 ntBASIC17.48■□□□□ 0.39
Shox2P70390 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.48■□□□□ 0.39
Shox2P70390 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shox2P70390 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shox2P70390 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms