Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Crnkl1P63154 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Crnkl1P63154 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Crnkl1P63154 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.52■□□□□ 0.4
Crnkl1P63154 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.52■□□□□ 0.4
Crnkl1P63154 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.52■□□□□ 0.4
Crnkl1P63154 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Crnkl1P63154 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Crnkl1P63154 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Crnkl1P63154 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Crnkl1P63154 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Crnkl1P63154 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.51■□□□□ 0.39
Crnkl1P63154 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.51■□□□□ 0.39
Crnkl1P63154 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.51■□□□□ 0.39
Crnkl1P63154 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.51■□□□□ 0.39
Crnkl1P63154 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Crnkl1P63154 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Crnkl1P63154 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Crnkl1P63154 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Crnkl1P63154 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Crnkl1P63154 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.49■□□□□ 0.39
Crnkl1P63154 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Crnkl1P63154 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.49■□□□□ 0.39
Crnkl1P63154 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.49■□□□□ 0.39
Crnkl1P63154 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.49■□□□□ 0.39
Crnkl1P63154 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Crnkl1P63154 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Crnkl1P63154 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Crnkl1P63154 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Crnkl1P63154 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Crnkl1P63154 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms