Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp20P57748 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Mmp20P57748 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Mmp20P57748 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.29■□□□□ 0.84
Mmp20P57748 Gm29518-201ENSMUST00000190858 372 ntBASIC20.29■□□□□ 0.84
Mmp20P57748 Gm7213-201ENSMUST00000215977 950 ntBASIC20.29■□□□□ 0.84
Mmp20P57748 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Mmp20P57748 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Mmp20P57748 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp20P57748 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.28■□□□□ 0.84
Mmp20P57748 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.28■□□□□ 0.84
Mmp20P57748 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.28■□□□□ 0.84
Mmp20P57748 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Gm17971-201ENSMUST00000190239 806 ntBASIC20.28■□□□□ 0.84
Mmp20P57748 Gm37025-201ENSMUST00000195159 829 ntBASIC20.28■□□□□ 0.84
Mmp20P57748 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.28■□□□□ 0.84
Mmp20P57748 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.28■□□□□ 0.84
Mmp20P57748 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.28■□□□□ 0.84
Mmp20P57748 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp20P57748 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.27■□□□□ 0.84
Mmp20P57748 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.27■□□□□ 0.84
Mmp20P57748 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.27■□□□□ 0.84
Mmp20P57748 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp20P57748 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.26■□□□□ 0.83
Mmp20P57748 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Mmp20P57748 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.26■□□□□ 0.83
Mmp20P57748 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.26■□□□□ 0.83
Mmp20P57748 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp20P57748 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp20P57748 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Mmp20P57748 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.24■□□□□ 0.83
Mmp20P57748 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp20P57748 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp20P57748 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp20P57748 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp20P57748 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp20P57748 Gm17808-201ENSMUST00000200859 894 ntBASIC20.23■□□□□ 0.83
Mmp20P57748 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.23■□□□□ 0.83
Mmp20P57748 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp20P57748 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp20P57748 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mmp20P57748 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp20P57748 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms