Protein–RNA interactions for Protein: P54279

Pms2, Mismatch repair endonuclease PMS2, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pms2P54279 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Pms2P54279 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pms2P54279 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.14■□□□□ 0.49
Pms2P54279 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Pms2P54279 Gm6211-202ENSMUST00000167849 925 ntBASIC18.14■□□□□ 0.49
Pms2P54279 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pms2P54279 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pms2P54279 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pms2P54279 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pms2P54279 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.13■□□□□ 0.49
Pms2P54279 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Pms2P54279 Gm8495-201ENSMUST00000188740 694 ntBASIC18.13■□□□□ 0.49
Pms2P54279 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pms2P54279 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.12■□□□□ 0.49
Pms2P54279 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pms2P54279 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pms2P54279 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pms2P54279 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pms2P54279 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pms2P54279 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.12■□□□□ 0.49
Pms2P54279 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pms2P54279 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pms2P54279 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
Pms2P54279 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pms2P54279 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.11■□□□□ 0.49
Pms2P54279 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.11■□□□□ 0.49
Pms2P54279 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pms2P54279 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pms2P54279 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Pms2P54279 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Gm7290-201ENSMUST00000104990 617 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Gm12918-201ENSMUST00000120234 636 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Gm15710-201ENSMUST00000121821 636 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Gm5075-201ENSMUST00000196916 622 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.1■□□□□ 0.49
Pms2P54279 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pms2P54279 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pms2P54279 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pms2P54279 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pms2P54279 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pms2P54279 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Pms2P54279 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pms2P54279 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms