Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lbx1P52955 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.1■□□□□ 0.33
Lbx1P52955 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Lbx1P52955 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Lbx1P52955 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Lbx1P52955 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Lbx1P52955 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lbx1P52955 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Lbx1P52955 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lbx1P52955 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lbx1P52955 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Lbx1P52955 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.09■□□□□ 0.33
Lbx1P52955 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.09■□□□□ 0.33
Lbx1P52955 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.09■□□□□ 0.33
Lbx1P52955 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.09■□□□□ 0.33
Lbx1P52955 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.09■□□□□ 0.33
Lbx1P52955 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.09■□□□□ 0.33
Lbx1P52955 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.09■□□□□ 0.33
Lbx1P52955 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lbx1P52955 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lbx1P52955 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lbx1P52955 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lbx1P52955 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.08■□□□□ 0.32
Lbx1P52955 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Lbx1P52955 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lbx1P52955 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Lbx1P52955 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lbx1P52955 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.07■□□□□ 0.32
Lbx1P52955 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.07■□□□□ 0.32
Lbx1P52955 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.07■□□□□ 0.32
Lbx1P52955 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.07■□□□□ 0.32
Lbx1P52955 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.07■□□□□ 0.32
Lbx1P52955 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.07■□□□□ 0.32
Lbx1P52955 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lbx1P52955 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.07■□□□□ 0.32
Lbx1P52955 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lbx1P52955 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.06■□□□□ 0.32
Lbx1P52955 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.06■□□□□ 0.32
Lbx1P52955 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.06■□□□□ 0.32
Lbx1P52955 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.06■□□□□ 0.32
Lbx1P52955 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lbx1P52955 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lbx1P52955 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lbx1P52955 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lbx1P52955 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lbx1P52955 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lbx1P52955 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.05■□□□□ 0.32
Lbx1P52955 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.05■□□□□ 0.32
Lbx1P52955 Gm15920-201ENSMUST00000118998 402 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms