Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SftpdP50404 Gm10418-201ENSMUST00000100943 576 ntBASIC18.66■□□□□ 0.58
SftpdP50404 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
SftpdP50404 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SftpdP50404 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.66■□□□□ 0.58
SftpdP50404 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.66■□□□□ 0.58
SftpdP50404 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.66■□□□□ 0.58
SftpdP50404 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SftpdP50404 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.66■□□□□ 0.58
SftpdP50404 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.65■□□□□ 0.58
SftpdP50404 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SftpdP50404 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.65■□□□□ 0.58
SftpdP50404 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SftpdP50404 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SftpdP50404 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.65■□□□□ 0.58
SftpdP50404 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.65■□□□□ 0.58
SftpdP50404 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.65■□□□□ 0.58
SftpdP50404 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.65■□□□□ 0.58
SftpdP50404 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SftpdP50404 Gm5643-201ENSMUST00000117081 966 ntBASIC18.64■□□□□ 0.57
SftpdP50404 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.64■□□□□ 0.57
SftpdP50404 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.64■□□□□ 0.57
SftpdP50404 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.64■□□□□ 0.57
SftpdP50404 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SftpdP50404 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
SftpdP50404 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SftpdP50404 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.62■□□□□ 0.57
SftpdP50404 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.62■□□□□ 0.57
SftpdP50404 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SftpdP50404 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SftpdP50404 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SftpdP50404 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
SftpdP50404 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.61■□□□□ 0.57
SftpdP50404 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.61■□□□□ 0.57
SftpdP50404 Gm27011-201ENSMUST00000182352 972 ntBASIC18.61■□□□□ 0.57
SftpdP50404 Gm18025-201ENSMUST00000221733 862 ntBASIC18.61■□□□□ 0.57
SftpdP50404 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SftpdP50404 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SftpdP50404 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms