Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Msh2P43247 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.24■□□□□ 0.51
Msh2P43247 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.24■□□□□ 0.51
Msh2P43247 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Msh2P43247 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Msh2P43247 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh2P43247 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Msh2P43247 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Msh2P43247 Gm10602-201ENSMUST00000098239 609 ntBASIC18.23■□□□□ 0.51
Msh2P43247 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Msh2P43247 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Msh2P43247 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh2P43247 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Msh2P43247 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.22■□□□□ 0.51
Msh2P43247 Gm6211-202ENSMUST00000167849 925 ntBASIC18.22■□□□□ 0.51
Msh2P43247 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Msh2P43247 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.22■□□□□ 0.51
Msh2P43247 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Msh2P43247 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh2P43247 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.21■□□□□ 0.51
Msh2P43247 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.21■□□□□ 0.51
Msh2P43247 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Msh2P43247 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.21■□□□□ 0.51
Msh2P43247 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Msh2P43247 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Msh2P43247 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Msh2P43247 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.21■□□□□ 0.51
Msh2P43247 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Msh2P43247 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Msh2P43247 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Msh2P43247 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.2■□□□□ 0.5
Msh2P43247 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh2P43247 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.2■□□□□ 0.5
Msh2P43247 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.2■□□□□ 0.5
Msh2P43247 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh2P43247 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.2■□□□□ 0.5
Msh2P43247 Gm13148-201ENSMUST00000118892 745 ntBASIC18.2■□□□□ 0.5
Msh2P43247 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Msh2P43247 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Msh2P43247 Gm29257-201ENSMUST00000186115 639 ntBASIC18.2■□□□□ 0.5
Msh2P43247 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh2P43247 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh2P43247 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.2■□□□□ 0.5
Msh2P43247 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Msh2P43247 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Msh2P43247 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Msh2P43247 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Msh2P43247 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.19■□□□□ 0.5
Msh2P43247 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Msh2P43247 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.19■□□□□ 0.5
Msh2P43247 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Msh2P43247 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms