Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.46■□□□□ 0.39
Cd9P40240 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.46■□□□□ 0.39
Cd9P40240 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.46■□□□□ 0.39
Cd9P40240 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.46■□□□□ 0.39
Cd9P40240 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd9P40240 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Cd9P40240 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd9P40240 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.46■□□□□ 0.38
Cd9P40240 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd9P40240 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cd9P40240 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd9P40240 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd9P40240 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cd9P40240 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.45■□□□□ 0.38
Cd9P40240 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd9P40240 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd9P40240 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd9P40240 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd9P40240 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.45■□□□□ 0.38
Cd9P40240 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cd9P40240 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.44■□□□□ 0.38
Cd9P40240 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.44■□□□□ 0.38
Cd9P40240 Trmt13-210ENSMUST00000198454 880 ntBASIC17.44■□□□□ 0.38
Cd9P40240 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cd9P40240 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.44■□□□□ 0.38
Cd9P40240 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.44■□□□□ 0.38
Cd9P40240 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cd9P40240 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.44■□□□□ 0.38
Cd9P40240 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd9P40240 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd9P40240 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.43■□□□□ 0.38
Cd9P40240 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd9P40240 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cd9P40240 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd9P40240 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd9P40240 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.43■□□□□ 0.38
Cd9P40240 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.43■□□□□ 0.38
Cd9P40240 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.43■□□□□ 0.38
Cd9P40240 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Cd9P40240 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cd9P40240 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.42■□□□□ 0.38
Cd9P40240 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd9P40240 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cd9P40240 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd9P40240 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd9P40240 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd9P40240 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.42■□□□□ 0.38
Cd9P40240 Gm5643-201ENSMUST00000117081 966 ntBASIC17.42■□□□□ 0.38
Cd9P40240 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.42■□□□□ 0.38
Cd9P40240 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd9P40240 Gm37292-201ENSMUST00000192062 758 ntBASIC17.42■□□□□ 0.38
Cd9P40240 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cd9P40240 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cd9P40240 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd9P40240 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cd9P40240 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cd9P40240 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.42■□□□□ 0.38
Cd9P40240 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.41■□□□□ 0.38
Cd9P40240 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Cd9P40240 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.41■□□□□ 0.38
Cd9P40240 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Cd9P40240 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cd9P40240 Gm42545-201ENSMUST00000202755 922 ntBASIC17.41■□□□□ 0.38
Cd9P40240 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.41■□□□□ 0.38
Cd9P40240 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.41■□□□□ 0.38
Cd9P40240 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd9P40240 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Cd9P40240 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cd9P40240 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms