Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Timp3P39876 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.49□□□□□ -0.09
Timp3P39876 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Timp3P39876 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Timp3P39876 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Mir1199-201ENSMUST00000117015 119 ntBASIC14.48□□□□□ -0.09
Timp3P39876 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.48□□□□□ -0.09
Timp3P39876 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.48□□□□□ -0.09
Timp3P39876 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Timp3P39876 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Timp3P39876 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Timp3P39876 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Timp3P39876 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Timp3P39876 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.46□□□□□ -0.09
Timp3P39876 Gm10138-203ENSMUST00000206952 366 ntBASIC14.46□□□□□ -0.09
Timp3P39876 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Timp3P39876 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Timp3P39876 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Timp3P39876 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Timp3P39876 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Timp3P39876 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Timp3P39876 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.45□□□□□ -0.1
Timp3P39876 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Timp3P39876 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Timp3P39876 Mir7071-201ENSMUST00000184847 69 ntBASIC14.45□□□□□ -0.1
Timp3P39876 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Timp3P39876 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Timp3P39876 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Gm715-201ENSMUST00000117865 831 ntBASIC14.44□□□□□ -0.1
Timp3P39876 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.44□□□□□ -0.1
Timp3P39876 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.44□□□□□ -0.1
Timp3P39876 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Timp3P39876 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.44□□□□□ -0.1
Timp3P39876 Gm38285-201ENSMUST00000192928 922 ntBASIC14.44□□□□□ -0.1
Timp3P39876 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms