Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.92■□□□□ 0.3
Cdh4P39038 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh4P39038 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh4P39038 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh4P39038 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh4P39038 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh4P39038 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh4P39038 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cdh4P39038 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.91■□□□□ 0.3
Cdh4P39038 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh4P39038 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Gm10698-201ENSMUST00000182663 604 ntBASIC16.91■□□□□ 0.3
Cdh4P39038 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.91■□□□□ 0.3
Cdh4P39038 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh4P39038 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.91■□□□□ 0.3
Cdh4P39038 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.91■□□□□ 0.3
Cdh4P39038 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh4P39038 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Cdh4P39038 Gm18025-201ENSMUST00000221733 862 ntBASIC16.9■□□□□ 0.3
Cdh4P39038 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cdh4P39038 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh4P39038 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cdh4P39038 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.9■□□□□ 0.3
Cdh4P39038 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdh4P39038 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdh4P39038 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cdh4P39038 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cdh4P39038 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdh4P39038 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh4P39038 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdh4P39038 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Cdh4P39038 Gm42545-201ENSMUST00000202755 922 ntBASIC16.88■□□□□ 0.29
Cdh4P39038 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cdh4P39038 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh4P39038 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cdh4P39038 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdh4P39038 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.87■□□□□ 0.29
Cdh4P39038 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.87■□□□□ 0.29
Cdh4P39038 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.87■□□□□ 0.29
Cdh4P39038 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cdh4P39038 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.87■□□□□ 0.29
Cdh4P39038 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdh4P39038 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh4P39038 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdh4P39038 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdh4P39038 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.86■□□□□ 0.29
Cdh4P39038 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
Cdh4P39038 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.86■□□□□ 0.29
Cdh4P39038 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms