Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.45■□□□□ 0.38
HmgclP38060 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.45■□□□□ 0.38
HmgclP38060 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.45■□□□□ 0.38
HmgclP38060 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.45■□□□□ 0.38
HmgclP38060 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HmgclP38060 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
HmgclP38060 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HmgclP38060 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.45■□□□□ 0.38
HmgclP38060 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HmgclP38060 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HmgclP38060 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HmgclP38060 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HmgclP38060 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.44■□□□□ 0.38
HmgclP38060 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HmgclP38060 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HmgclP38060 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.44■□□□□ 0.38
HmgclP38060 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.44■□□□□ 0.38
HmgclP38060 Gm20760-201ENSMUST00000179197 648 ntBASIC17.44■□□□□ 0.38
HmgclP38060 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.44■□□□□ 0.38
HmgclP38060 Gm18025-201ENSMUST00000221733 862 ntBASIC17.44■□□□□ 0.38
HmgclP38060 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HmgclP38060 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.44■□□□□ 0.38
HmgclP38060 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HmgclP38060 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HmgclP38060 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.44■□□□□ 0.38
HmgclP38060 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
HmgclP38060 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HmgclP38060 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HmgclP38060 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HmgclP38060 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.43■□□□□ 0.38
HmgclP38060 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HmgclP38060 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Gm13401-201ENSMUST00000117074 291 ntBASIC17.43■□□□□ 0.38
HmgclP38060 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HmgclP38060 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.42■□□□□ 0.38
HmgclP38060 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.42■□□□□ 0.38
HmgclP38060 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Mir8112-201ENSMUST00000184382 131 ntBASIC17.42■□□□□ 0.38
HmgclP38060 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.42■□□□□ 0.38
HmgclP38060 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.42■□□□□ 0.38
HmgclP38060 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.42■□□□□ 0.38
HmgclP38060 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.42■□□□□ 0.38
HmgclP38060 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HmgclP38060 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HmgclP38060 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HmgclP38060 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HmgclP38060 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HmgclP38060 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.41■□□□□ 0.38
HmgclP38060 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HmgclP38060 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HmgclP38060 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HmgclP38060 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.41■□□□□ 0.38
HmgclP38060 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.41■□□□□ 0.38
HmgclP38060 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HmgclP38060 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.41■□□□□ 0.38
HmgclP38060 Gm42545-201ENSMUST00000202755 922 ntBASIC17.41■□□□□ 0.38
HmgclP38060 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HmgclP38060 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.41■□□□□ 0.38
HmgclP38060 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HmgclP38060 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HmgclP38060 Gm6576-201ENSMUST00000169678 883 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms