Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.62■□□□□ 0.41
LdlrP35951 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
LdlrP35951 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LdlrP35951 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.61■□□□□ 0.41
LdlrP35951 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
LdlrP35951 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LdlrP35951 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.61■□□□□ 0.41
LdlrP35951 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.61■□□□□ 0.41
LdlrP35951 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LdlrP35951 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.61■□□□□ 0.41
LdlrP35951 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.61■□□□□ 0.41
LdlrP35951 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LdlrP35951 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.6■□□□□ 0.41
LdlrP35951 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LdlrP35951 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.6■□□□□ 0.41
LdlrP35951 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LdlrP35951 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LdlrP35951 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Gm5408-201ENSMUST00000197998 747 ntBASIC17.6■□□□□ 0.41
LdlrP35951 Gm20049-201ENSMUST00000219950 730 ntBASIC17.6■□□□□ 0.41
LdlrP35951 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LdlrP35951 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.6■□□□□ 0.41
LdlrP35951 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LdlrP35951 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
LdlrP35951 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.59■□□□□ 0.41
LdlrP35951 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LdlrP35951 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.59■□□□□ 0.41
LdlrP35951 Gm13168-201ENSMUST00000121771 632 ntBASIC17.59■□□□□ 0.41
LdlrP35951 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Gm6365-201ENSMUST00000054711 744 ntBASIC17.59■□□□□ 0.41
LdlrP35951 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
LdlrP35951 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LdlrP35951 Idnk-204ENSMUST00000226010 1898 ntBASIC17.58■□□□□ 0.41
LdlrP35951 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LdlrP35951 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LdlrP35951 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LdlrP35951 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LdlrP35951 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.58■□□□□ 0.4
LdlrP35951 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.58■□□□□ 0.4
LdlrP35951 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LdlrP35951 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.57■□□□□ 0.4
LdlrP35951 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
LdlrP35951 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LdlrP35951 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LdlrP35951 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LdlrP35951 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LdlrP35951 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LdlrP35951 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms