Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Foxa2P35583 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa2P35583 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxa2P35583 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Foxa2P35583 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.89□□□□□ -0.03
Foxa2P35583 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.89□□□□□ -0.03
Foxa2P35583 Rab3c-203ENSMUST00000224180 967 ntBASIC14.89□□□□□ -0.03
Foxa2P35583 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Foxa2P35583 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Foxa2P35583 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxa2P35583 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Foxa2P35583 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.88□□□□□ -0.03
Foxa2P35583 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.88□□□□□ -0.03
Foxa2P35583 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxa2P35583 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.87□□□□□ -0.03
Foxa2P35583 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.87□□□□□ -0.03
Foxa2P35583 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.87□□□□□ -0.03
Foxa2P35583 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.87□□□□□ -0.03
Foxa2P35583 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxa2P35583 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Gm37179-201ENSMUST00000194862 823 ntBASIC14.86□□□□□ -0.03
Foxa2P35583 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Foxa2P35583 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Flg-201ENSMUST00000050758 1488 ntBASIC14.86□□□□□ -0.03
Foxa2P35583 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Foxa2P35583 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxa2P35583 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.85□□□□□ -0.03
Foxa2P35583 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.85□□□□□ -0.03
Foxa2P35583 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.85□□□□□ -0.03
Foxa2P35583 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa2P35583 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms