Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxd8P23463 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxd8P23463 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Mir8112-201ENSMUST00000184382 131 ntBASIC18.34■□□□□ 0.53
Hoxd8P23463 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxd8P23463 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxd8P23463 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxd8P23463 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hoxd8P23463 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxd8P23463 Gm33142-201ENSMUST00000193913 867 ntBASIC18.33■□□□□ 0.52
Hoxd8P23463 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxd8P23463 Gm7367-201ENSMUST00000057611 492 ntBASIC18.33■□□□□ 0.52
Hoxd8P23463 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hoxd8P23463 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hoxd8P23463 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.32■□□□□ 0.52
Hoxd8P23463 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hoxd8P23463 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hoxd8P23463 Idnk-204ENSMUST00000226010 1898 ntBASIC18.31■□□□□ 0.52
Hoxd8P23463 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Hoxd8P23463 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Hoxd8P23463 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hoxd8P23463 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hoxd8P23463 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gm21559-201ENSMUST00000220638 855 ntBASIC18.31■□□□□ 0.52
Hoxd8P23463 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hoxd8P23463 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gm8587-201ENSMUST00000076538 843 ntBASIC18.31■□□□□ 0.52
Hoxd8P23463 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hoxd8P23463 Golph3-205ENSMUST00000228671 2842 ntBASIC18.31■□□□□ 0.52
Hoxd8P23463 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.3■□□□□ 0.52
Hoxd8P23463 Gm25016-201ENSMUST00000158399 131 ntBASIC18.3■□□□□ 0.52
Hoxd8P23463 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxd8P23463 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Hoxd8P23463 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.3■□□□□ 0.52
Hoxd8P23463 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxd8P23463 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hoxd8P23463 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hoxd8P23463 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.3■□□□□ 0.52
Hoxd8P23463 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Hoxd8P23463 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hoxd8P23463 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms