Protein–RNA interactions for Protein: P15508

Sptb, Spectrin beta chain, erythrocytic, mousemouse

Predictions only

Length 2,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SptbP15508 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.63■□□□□ 0.25
SptbP15508 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Gm12085-201ENSMUST00000119263 940 ntBASIC16.63■□□□□ 0.25
SptbP15508 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.63■□□□□ 0.25
SptbP15508 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.63■□□□□ 0.25
SptbP15508 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.63■□□□□ 0.25
SptbP15508 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SptbP15508 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SptbP15508 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.63■□□□□ 0.25
SptbP15508 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.63■□□□□ 0.25
SptbP15508 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.63■□□□□ 0.25
SptbP15508 Odf3b-204ENSMUST00000227834 930 ntBASIC16.63■□□□□ 0.25
SptbP15508 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SptbP15508 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SptbP15508 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.62■□□□□ 0.25
SptbP15508 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SptbP15508 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SptbP15508 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.61■□□□□ 0.25
SptbP15508 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.61■□□□□ 0.25
SptbP15508 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
SptbP15508 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.61■□□□□ 0.25
SptbP15508 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SptbP15508 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SptbP15508 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SptbP15508 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.61■□□□□ 0.25
SptbP15508 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.61■□□□□ 0.25
SptbP15508 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SptbP15508 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SptbP15508 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.6■□□□□ 0.25
SptbP15508 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
SptbP15508 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SptbP15508 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.6■□□□□ 0.25
SptbP15508 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SptbP15508 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.59■□□□□ 0.25
SptbP15508 Gm11539-201ENSMUST00000119837 557 ntBASIC16.59■□□□□ 0.25
SptbP15508 Gm13436-201ENSMUST00000120418 567 ntBASIC16.59■□□□□ 0.25
SptbP15508 Gm7889-201ENSMUST00000185591 958 ntBASIC16.59■□□□□ 0.25
SptbP15508 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SptbP15508 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.59■□□□□ 0.25
SptbP15508 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SptbP15508 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.59■□□□□ 0.25
SptbP15508 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SptbP15508 Gm11643-201ENSMUST00000119578 864 ntBASIC16.58■□□□□ 0.25
SptbP15508 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SptbP15508 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.58■□□□□ 0.25
SptbP15508 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.58■□□□□ 0.25
SptbP15508 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SptbP15508 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.58■□□□□ 0.25
SptbP15508 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SptbP15508 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SptbP15508 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SptbP15508 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms