Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.31■□□□□ 0.2
Irf1P15314 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf1P15314 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf1P15314 Rarb-207ENSMUST00000225921 2756 ntBASIC16.31■□□□□ 0.2
Irf1P15314 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Irf1P15314 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Irf1P15314 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.31■□□□□ 0.2
Irf1P15314 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Irf1P15314 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Irf1P15314 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Irf1P15314 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Gm5643-201ENSMUST00000117081 966 ntBASIC16.3■□□□□ 0.2
Irf1P15314 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Irf1P15314 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.3■□□□□ 0.2
Irf1P15314 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf1P15314 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.29■□□□□ 0.2
Irf1P15314 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Irf1P15314 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Irf1P15314 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Irf1P15314 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.29■□□□□ 0.2
Irf1P15314 Gm11927-201ENSMUST00000118472 759 ntBASIC16.29■□□□□ 0.2
Irf1P15314 Gm13158-201ENSMUST00000122007 736 ntBASIC16.29■□□□□ 0.2
Irf1P15314 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Irf1P15314 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf1P15314 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.28■□□□□ 0.2
Irf1P15314 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.28■□□□□ 0.2
Irf1P15314 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Irf1P15314 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.28■□□□□ 0.2
Irf1P15314 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.28■□□□□ 0.2
Irf1P15314 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf1P15314 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.27■□□□□ 0.2
Irf1P15314 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.27■□□□□ 0.2
Irf1P15314 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.27■□□□□ 0.2
Irf1P15314 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Irf1P15314 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.27■□□□□ 0.2
Irf1P15314 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf1P15314 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Irf1P15314 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Irf1P15314 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Irf1P15314 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Irf1P15314 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Irf1P15314 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms