Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.38■□□□□ 0.05
PtcraP0C6B2 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.38■□□□□ 0.05
PtcraP0C6B2 Mir8112-201ENSMUST00000184382 131 ntBASIC15.38■□□□□ 0.05
PtcraP0C6B2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.38■□□□□ 0.05
PtcraP0C6B2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PtcraP0C6B2 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.37■□□□□ 0.05
PtcraP0C6B2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.37■□□□□ 0.05
PtcraP0C6B2 Gm18025-201ENSMUST00000221733 862 ntBASIC15.37■□□□□ 0.05
PtcraP0C6B2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PtcraP0C6B2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.36■□□□□ 0.05
PtcraP0C6B2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Gm5643-201ENSMUST00000117081 966 ntBASIC15.36■□□□□ 0.05
PtcraP0C6B2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.36■□□□□ 0.05
PtcraP0C6B2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.36■□□□□ 0.05
PtcraP0C6B2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PtcraP0C6B2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.35■□□□□ 0.05
PtcraP0C6B2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.35■□□□□ 0.05
PtcraP0C6B2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PtcraP0C6B2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.34■□□□□ 0.05
PtcraP0C6B2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms