Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.82■□□□□ 0.12
Hdac3O88895 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hdac3O88895 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hdac3O88895 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.82■□□□□ 0.12
Hdac3O88895 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hdac3O88895 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Hdac3O88895 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.81■□□□□ 0.12
Hdac3O88895 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.81■□□□□ 0.12
Hdac3O88895 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hdac3O88895 Mir5133-201ENSMUST00000174955 77 ntBASIC15.81■□□□□ 0.12
Hdac3O88895 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hdac3O88895 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Hdac3O88895 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Hdac3O88895 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hdac3O88895 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
Hdac3O88895 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.8■□□□□ 0.12
Hdac3O88895 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Hdac3O88895 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.8■□□□□ 0.12
Hdac3O88895 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.8■□□□□ 0.12
Hdac3O88895 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.8■□□□□ 0.12
Hdac3O88895 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.8■□□□□ 0.12
Hdac3O88895 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hdac3O88895 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Hdac3O88895 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hdac3O88895 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.8■□□□□ 0.12
Hdac3O88895 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.79■□□□□ 0.12
Hdac3O88895 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hdac3O88895 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.79■□□□□ 0.12
Hdac3O88895 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Hdac3O88895 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hdac3O88895 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.79■□□□□ 0.12
Hdac3O88895 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hdac3O88895 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.78■□□□□ 0.12
Hdac3O88895 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.78■□□□□ 0.12
Hdac3O88895 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hdac3O88895 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.78■□□□□ 0.12
Hdac3O88895 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.78■□□□□ 0.12
Hdac3O88895 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hdac3O88895 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.78■□□□□ 0.12
Hdac3O88895 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.78■□□□□ 0.12
Hdac3O88895 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hdac3O88895 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms