Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha4O88689 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha4O88689 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha4O88689 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdha4O88689 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha4O88689 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdha4O88689 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdha4O88689 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.77■□□□□ 0.76
Pcdha4O88689 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdha4O88689 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdha4O88689 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdha4O88689 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha4O88689 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdha4O88689 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdha4O88689 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.75
Pcdha4O88689 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Gm715-201ENSMUST00000117865 831 ntBASIC19.76■□□□□ 0.75
Pcdha4O88689 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdha4O88689 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdha4O88689 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha4O88689 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdha4O88689 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdha4O88689 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdha4O88689 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdha4O88689 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.75■□□□□ 0.75
Pcdha4O88689 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha4O88689 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha4O88689 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Gm10517-202ENSMUST00000192970 758 ntBASIC19.74■□□□□ 0.75
Pcdha4O88689 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha4O88689 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha4O88689 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdha4O88689 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdha4O88689 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdha4O88689 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdha4O88689 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha4O88689 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha4O88689 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.72■□□□□ 0.75
Pcdha4O88689 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdha4O88689 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdha4O88689 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdha4O88689 Gm4974-201ENSMUST00000209974 875 ntBASIC19.72■□□□□ 0.75
Pcdha4O88689 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha4O88689 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms