Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cldn1O88551 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cldn1O88551 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Gm14859-201ENSMUST00000117752 357 ntBASIC15.14■□□□□ 0.01
Cldn1O88551 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.14■□□□□ 0.01
Cldn1O88551 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.14■□□□□ 0.01
Cldn1O88551 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cldn1O88551 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cldn1O88551 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn1O88551 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cldn1O88551 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldn1O88551 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Gm45058-201ENSMUST00000205810 766 ntBASIC15.13■□□□□ 0.01
Cldn1O88551 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cldn1O88551 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn1O88551 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Cldn1O88551 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.12■□□□□ 0.01
Cldn1O88551 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldn1O88551 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldn1O88551 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cldn1O88551 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cldn1O88551 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.12■□□□□ 0.01
Cldn1O88551 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cldn1O88551 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn1O88551 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cldn1O88551 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.11■□□□□ 0.01
Cldn1O88551 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cldn1O88551 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cldn1O88551 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cldn1O88551 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Cldn1O88551 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.11■□□□□ 0.01
Cldn1O88551 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.11■□□□□ 0.01
Cldn1O88551 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cldn1O88551 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.11■□□□□ 0.01
Cldn1O88551 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.11■□□□□ 0.01
Cldn1O88551 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn1O88551 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cldn1O88551 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cldn1O88551 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn1O88551 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.1■□□□□ 0.01
Cldn1O88551 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms