Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Olfr129-201ENSMUST00000122318 993 ntBASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.43■□□□□ 0.22
Tnfrsf17O88472 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf17O88472 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gm45328-201ENSMUST00000210942 917 ntBASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf17O88472 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Mir770-201ENSMUST00000103252 94 ntBASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Gm26039-201ENSMUST00000158152 144 ntBASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Gm43347-201ENSMUST00000200226 580 ntBASIC16.41■□□□□ 0.22
Tnfrsf17O88472 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf17O88472 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Gm24841-201ENSMUST00000158676 357 ntBASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf17O88472 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tnfrsf17O88472 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Tnfrsf17O88472 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tnfrsf17O88472 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Tnfrsf17O88472 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf17O88472 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms