Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1bO88384 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1bO88384 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1bO88384 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1bO88384 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.88■□□□□ 0.29
Vti1bO88384 Gm7290-201ENSMUST00000104990 617 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Gm12918-201ENSMUST00000120234 636 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Gm15710-201ENSMUST00000121821 636 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vti1bO88384 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1bO88384 Gm5075-201ENSMUST00000196916 622 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Vti1bO88384 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vti1bO88384 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1bO88384 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.88■□□□□ 0.29
Vti1bO88384 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vti1bO88384 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.88■□□□□ 0.29
Vti1bO88384 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Vti1bO88384 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.87■□□□□ 0.29
Vti1bO88384 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.87■□□□□ 0.29
Vti1bO88384 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.87■□□□□ 0.29
Vti1bO88384 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1bO88384 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.86■□□□□ 0.29
Vti1bO88384 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vti1bO88384 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vti1bO88384 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1bO88384 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vti1bO88384 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.85■□□□□ 0.29
Vti1bO88384 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Gm12933-201ENSMUST00000120203 872 ntBASIC16.85■□□□□ 0.29
Vti1bO88384 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Gm8969-201ENSMUST00000199694 526 ntBASIC16.85■□□□□ 0.29
Vti1bO88384 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vti1bO88384 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.85■□□□□ 0.29
Vti1bO88384 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1bO88384 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vti1bO88384 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1bO88384 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.84■□□□□ 0.29
Vti1bO88384 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1bO88384 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1bO88384 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1bO88384 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms