Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pja1O55176 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.72■□□□□ 0.59
Pja1O55176 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pja1O55176 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Pja1O55176 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Pja1O55176 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.71■□□□□ 0.59
Pja1O55176 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pja1O55176 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Pja1O55176 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.7■□□□□ 0.58
Pja1O55176 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pja1O55176 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pja1O55176 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Pja1O55176 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.7■□□□□ 0.58
Pja1O55176 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.7■□□□□ 0.58
Pja1O55176 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.7■□□□□ 0.58
Pja1O55176 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Pja1O55176 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pja1O55176 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pja1O55176 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pja1O55176 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pja1O55176 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.69■□□□□ 0.58
Pja1O55176 Gm38285-201ENSMUST00000192928 922 ntBASIC18.69■□□□□ 0.58
Pja1O55176 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.69■□□□□ 0.58
Pja1O55176 Gm18671-201ENSMUST00000214826 683 ntBASIC18.69■□□□□ 0.58
Pja1O55176 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pja1O55176 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pja1O55176 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pja1O55176 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pja1O55176 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.68■□□□□ 0.58
Pja1O55176 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Gm42642-201ENSMUST00000200683 355 ntBASIC18.68■□□□□ 0.58
Pja1O55176 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Pja1O55176 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pja1O55176 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.68■□□□□ 0.58
Pja1O55176 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pja1O55176 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.67■□□□□ 0.58
Pja1O55176 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pja1O55176 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pja1O55176 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
Pja1O55176 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.67■□□□□ 0.58
Pja1O55176 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.67■□□□□ 0.58
Pja1O55176 Mir8112-201ENSMUST00000184382 131 ntBASIC18.67■□□□□ 0.58
Pja1O55176 AV356131-201ENSMUST00000206201 750 ntBASIC18.67■□□□□ 0.58
Pja1O55176 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pja1O55176 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms