Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm8969-201ENSMUST00000199694 526 ntBASIC18.02■□□□□ 0.48
Banf1O54962 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.02■□□□□ 0.48
Banf1O54962 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Banf1O54962 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.02■□□□□ 0.48
Banf1O54962 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Banf1O54962 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Banf1O54962 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Banf1O54962 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Banf1O54962 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.02■□□□□ 0.47
Banf1O54962 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.01■□□□□ 0.47
Banf1O54962 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Banf1O54962 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.01■□□□□ 0.47
Banf1O54962 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Banf1O54962 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18■□□□□ 0.47
Banf1O54962 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Banf1O54962 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Banf1O54962 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Banf1O54962 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18■□□□□ 0.47
Banf1O54962 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Banf1O54962 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Banf1O54962 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18■□□□□ 0.47
Banf1O54962 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Banf1O54962 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Banf1O54962 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Banf1O54962 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Banf1O54962 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Banf1O54962 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Banf1O54962 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Banf1O54962 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Banf1O54962 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.98■□□□□ 0.47
Banf1O54962 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.98■□□□□ 0.47
Banf1O54962 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.98■□□□□ 0.47
Banf1O54962 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Banf1O54962 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Banf1O54962 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.97■□□□□ 0.47
Banf1O54962 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.97■□□□□ 0.47
Banf1O54962 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Banf1O54962 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Banf1O54962 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Banf1O54962 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Banf1O54962 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms