Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Gm45906-201ENSMUST00000208911 1430 ntBASIC13□□□□□ -0.33
CrxO54751 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CrxO54751 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13□□□□□ -0.33
CrxO54751 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CrxO54751 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13□□□□□ -0.33
CrxO54751 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CrxO54751 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CrxO54751 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CrxO54751 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CrxO54751 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CrxO54751 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CrxO54751 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13□□□□□ -0.33
CrxO54751 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13□□□□□ -0.33
CrxO54751 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CrxO54751 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CrxO54751 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.99□□□□□ -0.33
CrxO54751 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CrxO54751 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CrxO54751 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.98□□□□□ -0.33
CrxO54751 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.98□□□□□ -0.33
CrxO54751 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CrxO54751 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CrxO54751 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CrxO54751 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.98□□□□□ -0.33
CrxO54751 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CrxO54751 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CrxO54751 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.97□□□□□ -0.33
CrxO54751 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.97□□□□□ -0.33
CrxO54751 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.97□□□□□ -0.33
CrxO54751 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CrxO54751 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.96□□□□□ -0.33
CrxO54751 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.96□□□□□ -0.33
CrxO54751 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CrxO54751 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.96□□□□□ -0.33
CrxO54751 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.96□□□□□ -0.33
CrxO54751 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CrxO54751 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CrxO54751 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CrxO54751 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CrxO54751 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CrxO54751 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CrxO54751 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms