Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nr1i3O35627 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.04■□□□□ 0.64
Nr1i3O35627 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Nr1i3O35627 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.04■□□□□ 0.64
Nr1i3O35627 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Nr1i3O35627 Mir5133-201ENSMUST00000174955 77 ntBASIC19.04■□□□□ 0.64
Nr1i3O35627 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nr1i3O35627 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Nr1i3O35627 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.03■□□□□ 0.64
Nr1i3O35627 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.03■□□□□ 0.64
Nr1i3O35627 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Gm27405-201ENSMUST00000184201 112 ntBASIC19.03■□□□□ 0.64
Nr1i3O35627 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.03■□□□□ 0.64
Nr1i3O35627 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.03■□□□□ 0.64
Nr1i3O35627 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1i3O35627 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1i3O35627 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1i3O35627 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nr1i3O35627 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1i3O35627 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1i3O35627 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nr1i3O35627 Gm11927-201ENSMUST00000118472 759 ntBASIC19.02■□□□□ 0.64
Nr1i3O35627 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1i3O35627 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1i3O35627 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nr1i3O35627 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1i3O35627 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1i3O35627 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1i3O35627 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1i3O35627 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1i3O35627 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nr1i3O35627 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nr1i3O35627 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Nr1i3O35627 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nr1i3O35627 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1i3O35627 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Nr1i3O35627 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Nr1i3O35627 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19■□□□□ 0.63
Nr1i3O35627 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nr1i3O35627 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Nr1i3O35627 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1i3O35627 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nr1i3O35627 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nr1i3O35627 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nr1i3O35627 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nr1i3O35627 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1i3O35627 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1i3O35627 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms