Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abca4O35600 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abca4O35600 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.68■□□□□ 0.26
Abca4O35600 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.68■□□□□ 0.26
Abca4O35600 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.68■□□□□ 0.26
Abca4O35600 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Abca4O35600 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Abca4O35600 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Abca4O35600 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca4O35600 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Gm12644-201ENSMUST00000119935 606 ntBASIC16.67■□□□□ 0.26
Abca4O35600 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Abca4O35600 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Abca4O35600 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca4O35600 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.67■□□□□ 0.26
Abca4O35600 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca4O35600 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca4O35600 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca4O35600 Psmb5-202ENSMUST00000227257 622 ntBASIC16.67■□□□□ 0.26
Abca4O35600 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca4O35600 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Abca4O35600 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Gm14822-201ENSMUST00000122247 291 ntBASIC16.66■□□□□ 0.26
Abca4O35600 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.66■□□□□ 0.26
Abca4O35600 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Abca4O35600 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Abca4O35600 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.66■□□□□ 0.26
Abca4O35600 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Abca4O35600 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abca4O35600 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.65■□□□□ 0.26
Abca4O35600 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Abca4O35600 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Abca4O35600 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca4O35600 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.64■□□□□ 0.25
Abca4O35600 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.64■□□□□ 0.25
Abca4O35600 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.64■□□□□ 0.25
Abca4O35600 Il3ra-202ENSMUST00000223589 738 ntBASIC16.64■□□□□ 0.25
Abca4O35600 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.64■□□□□ 0.25
Abca4O35600 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Gm14057-201ENSMUST00000120631 482 ntBASIC16.64■□□□□ 0.25
Abca4O35600 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.64■□□□□ 0.25
Abca4O35600 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca4O35600 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca4O35600 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca4O35600 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.63■□□□□ 0.25
Abca4O35600 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca4O35600 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Abca4O35600 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms