Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Clcn6O35454 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC18.77■□□□□ 0.6
Clcn6O35454 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC18.77■□□□□ 0.6
Clcn6O35454 CT010480.1-201ENSMUST00000223612 363 ntBASIC18.77■□□□□ 0.6
Clcn6O35454 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn6O35454 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clcn6O35454 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Clcn6O35454 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Clcn6O35454 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Clcn6O35454 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Clcn6O35454 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Gm26571-201ENSMUST00000181399 666 ntBASIC18.76■□□□□ 0.59
Clcn6O35454 Gm37809-201ENSMUST00000195050 931 ntBASIC18.76■□□□□ 0.59
Clcn6O35454 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC18.76■□□□□ 0.59
Clcn6O35454 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.76■□□□□ 0.59
Clcn6O35454 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clcn6O35454 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.76■□□□□ 0.59
Clcn6O35454 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.76■□□□□ 0.59
Clcn6O35454 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clcn6O35454 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcn6O35454 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clcn6O35454 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.75■□□□□ 0.59
Clcn6O35454 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.75■□□□□ 0.59
Clcn6O35454 Gm42778-201ENSMUST00000199644 553 ntBASIC18.75■□□□□ 0.59
Clcn6O35454 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Clcn6O35454 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcn6O35454 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Clcn6O35454 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC18.74■□□□□ 0.59
Clcn6O35454 Gm7291-201ENSMUST00000199147 382 ntBASIC18.74■□□□□ 0.59
Clcn6O35454 Gm44353-201ENSMUST00000200618 138 ntBASIC18.74■□□□□ 0.59
Clcn6O35454 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.74■□□□□ 0.59
Clcn6O35454 Gm18671-201ENSMUST00000214826 683 ntBASIC18.74■□□□□ 0.59
Clcn6O35454 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Clcn6O35454 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Clcn6O35454 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.74■□□□□ 0.59
Clcn6O35454 Gm18719-201ENSMUST00000196696 1413 ntBASIC18.74■□□□□ 0.59
Clcn6O35454 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.74■□□□□ 0.59
Clcn6O35454 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcn6O35454 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.73■□□□□ 0.59
Clcn6O35454 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.73■□□□□ 0.59
Clcn6O35454 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Gm13234-201ENSMUST00000120010 747 ntBASIC18.73■□□□□ 0.59
Clcn6O35454 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.73■□□□□ 0.59
Clcn6O35454 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.73■□□□□ 0.59
Clcn6O35454 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcn6O35454 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Clcn6O35454 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
Clcn6O35454 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.72■□□□□ 0.59
Clcn6O35454 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.72■□□□□ 0.59
Clcn6O35454 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcn6O35454 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clcn6O35454 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms