Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Gm6420-201ENSMUST00000193885 723 ntBASIC15.81■□□□□ 0.12
Alx4O35137 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.81■□□□□ 0.12
Alx4O35137 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alx4O35137 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Alx4O35137 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.8■□□□□ 0.12
Alx4O35137 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Alx4O35137 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Alx4O35137 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Alx4O35137 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alx4O35137 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Alx4O35137 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.79■□□□□ 0.12
Alx4O35137 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.79■□□□□ 0.12
Alx4O35137 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Alx4O35137 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Alx4O35137 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.79■□□□□ 0.12
Alx4O35137 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alx4O35137 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.78■□□□□ 0.12
Alx4O35137 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Gm15039-201ENSMUST00000118914 875 ntBASIC15.78■□□□□ 0.12
Alx4O35137 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Alx4O35137 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alx4O35137 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.77■□□□□ 0.12
Alx4O35137 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.77■□□□□ 0.12
Alx4O35137 Nespas-201ENSMUST00000143738 1083 ntBASIC15.77■□□□□ 0.12
Alx4O35137 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Alx4O35137 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx4O35137 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Alx4O35137 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.77■□□□□ 0.11
Alx4O35137 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx4O35137 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx4O35137 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Alx4O35137 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx4O35137 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx4O35137 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Alx4O35137 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx4O35137 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx4O35137 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Alx4O35137 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Alx4O35137 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx4O35137 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Alx4O35137 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Alx4O35137 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Alx4O35137 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms