Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hps1O08983 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Hps1O08983 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.42■□□□□ 0.22
Hps1O08983 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps1O08983 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps1O08983 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.42■□□□□ 0.22
Hps1O08983 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.42■□□□□ 0.22
Hps1O08983 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps1O08983 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hps1O08983 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.41■□□□□ 0.22
Hps1O08983 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hps1O08983 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Mir7071-201ENSMUST00000184847 69 ntBASIC16.41■□□□□ 0.22
Hps1O08983 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Gm4968-201ENSMUST00000071458 858 ntBASIC16.41■□□□□ 0.22
Hps1O08983 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hps1O08983 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps1O08983 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Hps1O08983 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.4■□□□□ 0.22
Hps1O08983 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hps1O08983 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hps1O08983 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Hps1O08983 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Hps1O08983 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hps1O08983 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Hps1O08983 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.39■□□□□ 0.21
Hps1O08983 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Hps1O08983 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Hps1O08983 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.39■□□□□ 0.21
Hps1O08983 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.39■□□□□ 0.21
Hps1O08983 Gm10252-201ENSMUST00000209541 832 ntBASIC16.39■□□□□ 0.21
Hps1O08983 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.39■□□□□ 0.21
Hps1O08983 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hps1O08983 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps1O08983 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.38■□□□□ 0.21
Hps1O08983 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.38■□□□□ 0.21
Hps1O08983 Gm5408-201ENSMUST00000197998 747 ntBASIC16.38■□□□□ 0.21
Hps1O08983 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.38■□□□□ 0.21
Hps1O08983 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hps1O08983 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hps1O08983 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hps1O08983 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Hps1O08983 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.37■□□□□ 0.21
Hps1O08983 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.37■□□□□ 0.21
Hps1O08983 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.37■□□□□ 0.21
Hps1O08983 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Hps1O08983 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hps1O08983 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hps1O08983 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.37■□□□□ 0.21
Hps1O08983 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Hps1O08983 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms