Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.16■□□□□ 0.5
Trove2O08848 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trove2O08848 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.16■□□□□ 0.5
Trove2O08848 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.16■□□□□ 0.5
Trove2O08848 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trove2O08848 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Trove2O08848 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trove2O08848 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Trove2O08848 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trove2O08848 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trove2O08848 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.15■□□□□ 0.5
Trove2O08848 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trove2O08848 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
Trove2O08848 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trove2O08848 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trove2O08848 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trove2O08848 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.14■□□□□ 0.49
Trove2O08848 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.14■□□□□ 0.49
Trove2O08848 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trove2O08848 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.13■□□□□ 0.49
Trove2O08848 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Trove2O08848 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.13■□□□□ 0.49
Trove2O08848 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trove2O08848 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trove2O08848 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trove2O08848 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Gm13146-201ENSMUST00000118508 780 ntBASIC18.12■□□□□ 0.49
Trove2O08848 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.12■□□□□ 0.49
Trove2O08848 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trove2O08848 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trove2O08848 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trove2O08848 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trove2O08848 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trove2O08848 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trove2O08848 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.11■□□□□ 0.49
Trove2O08848 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trove2O08848 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trove2O08848 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms