Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp35M0QWN7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Gm37055-201ENSMUST00000191866 133 ntBASIC18.96■□□□□ 0.63
Usp35M0QWN7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.96■□□□□ 0.63
Usp35M0QWN7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp35M0QWN7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.95■□□□□ 0.62
Usp35M0QWN7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Zfp783-201ENSMUST00000095946 670 ntBASIC18.95■□□□□ 0.62
Usp35M0QWN7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp35M0QWN7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Usp35M0QWN7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.94■□□□□ 0.62
Usp35M0QWN7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.94■□□□□ 0.62
Usp35M0QWN7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp35M0QWN7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.93■□□□□ 0.62
Usp35M0QWN7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp35M0QWN7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp35M0QWN7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Gm15565-201ENSMUST00000118890 427 ntBASIC18.91■□□□□ 0.62
Usp35M0QWN7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp35M0QWN7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms