Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Gm29791-202ENSMUST00000207888 369 ntBASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trav13d-3J3QMG8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav13d-3J3QMG8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Gm15375-201ENSMUST00000119510 849 ntBASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Mir6349-201ENSMUST00000184059 97 ntBASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Gm37856-201ENSMUST00000191634 999 ntBASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav13d-3J3QMG8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Gm13158-201ENSMUST00000122007 736 ntBASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Gm8969-201ENSMUST00000199694 526 ntBASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.54■□□□□ 0.08
Trav13d-3J3QMG8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Gm10418-201ENSMUST00000100943 576 ntBASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav13d-3J3QMG8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms