Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim55G3X8Y1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim55G3X8Y1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim55G3X8Y1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trim55G3X8Y1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim55G3X8Y1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim55G3X8Y1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim55G3X8Y1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim55G3X8Y1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms