Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm10013-201ENSMUST00000106074 672 ntBASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ptchd4B9EKX1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ptchd4B9EKX1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Gm7791-201ENSMUST00000219066 539 ntBASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ptchd4B9EKX1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Ptchd4B9EKX1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Gm23634-201ENSMUST00000175071 91 ntBASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ptchd4B9EKX1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 AC134329.2-201ENSMUST00000217897 428 ntBASIC19■□□□□ 0.63
Ptchd4B9EKX1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ptchd4B9EKX1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ptchd4B9EKX1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms