Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.28■□□□□ 0.68
Ttc38A3KMP2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ttc38A3KMP2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.27■□□□□ 0.68
Ttc38A3KMP2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc38A3KMP2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc38A3KMP2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ttc38A3KMP2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Gm10418-201ENSMUST00000100943 576 ntBASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.26■□□□□ 0.67
Ttc38A3KMP2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ttc38A3KMP2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Gm15375-201ENSMUST00000119510 849 ntBASIC19.25■□□□□ 0.67
Ttc38A3KMP2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Ttc38A3KMP2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ttc38A3KMP2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ttc38A3KMP2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ttc38A3KMP2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ttc38A3KMP2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms