Protein–RNA interactions for Protein: A1A535

Veph1, Ventricular zone-expressed PH domain-containing protein 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Veph1A1A535 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.81■□□□□ 0.6
Veph1A1A535 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Veph1A1A535 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Veph1A1A535 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.8■□□□□ 0.6
Veph1A1A535 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Veph1A1A535 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.8■□□□□ 0.6
Veph1A1A535 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.79■□□□□ 0.6
Veph1A1A535 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.79■□□□□ 0.6
Veph1A1A535 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Veph1A1A535 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.79■□□□□ 0.6
Veph1A1A535 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.79■□□□□ 0.6
Veph1A1A535 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Veph1A1A535 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.78■□□□□ 0.6
Veph1A1A535 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Veph1A1A535 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Veph1A1A535 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Gm38027-201ENSMUST00000192315 235 ntBASIC18.78■□□□□ 0.6
Veph1A1A535 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.78■□□□□ 0.6
Veph1A1A535 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Veph1A1A535 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Veph1A1A535 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Veph1A1A535 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Veph1A1A535 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.77■□□□□ 0.6
Veph1A1A535 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.77■□□□□ 0.6
Veph1A1A535 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.77■□□□□ 0.6
Veph1A1A535 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Veph1A1A535 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.77■□□□□ 0.6
Veph1A1A535 Gm18959-201ENSMUST00000208954 655 ntBASIC18.77■□□□□ 0.6
Veph1A1A535 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Veph1A1A535 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.77■□□□□ 0.6
Veph1A1A535 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.77■□□□□ 0.6
Veph1A1A535 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Veph1A1A535 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Veph1A1A535 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Veph1A1A535 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Veph1A1A535 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Veph1A1A535 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Veph1A1A535 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Veph1A1A535 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Veph1A1A535 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Veph1A1A535 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Veph1A1A535 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.75■□□□□ 0.59
Veph1A1A535 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.75■□□□□ 0.59
Veph1A1A535 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.75■□□□□ 0.59
Veph1A1A535 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Veph1A1A535 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Veph1A1A535 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.75■□□□□ 0.59
Veph1A1A535 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Veph1A1A535 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms