Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv13-2A0A140T8N6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm11927-201ENSMUST00000118472 759 ntBASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.34□□□□□ -0.43
Trbv13-2A0A140T8N6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv13-2A0A140T8N6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv13-2A0A140T8N6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Dio3-201ENSMUST00000097228 1449 ntBASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-2A0A140T8N6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-2A0A140T8N6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms