Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv16A0A0B4J1H3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm10493-201ENSMUST00000097270 612 ntBASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv16A0A0B4J1H3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv16A0A0B4J1H3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm10418-201ENSMUST00000100943 576 ntBASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv16A0A0B4J1H3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm7514-201ENSMUST00000209475 934 ntBASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv16A0A0B4J1H3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv16A0A0B4J1H3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 289.9 ms