Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv5A0A0B4J1G9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv5A0A0B4J1G9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv5A0A0B4J1G9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.24□□□□□ -0.13
Trbv5A0A0B4J1G9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Gm45102-201ENSMUST00000207427 857 ntBASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Spcs1-204ENSMUST00000226782 949 ntBASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv5A0A0B4J1G9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms