Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm24841-201ENSMUST00000158676 357 ntBASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm7791-201ENSMUST00000219066 539 ntBASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm9103-201ENSMUST00000119371 405 ntBASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm27389-201ENSMUST00000183622 195 ntBASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 BC021767-201ENSMUST00000126387 1716 ntBASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.66□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Gm7284-201ENSMUST00000131667 944 ntBASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ank2-226ENSMUST00000189368 339 ntBASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv3-4A0A0A6YXF1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv3-4A0A0A6YXF1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms