Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.47□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Gm11643-201ENSMUST00000119578 864 ntBASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Gm15378-201ENSMUST00000121894 207 ntBASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Gm29791-202ENSMUST00000207888 369 ntBASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-52A0A0A6YXC3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm18025-201ENSMUST00000221733 862 ntBASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-52A0A0A6YXC3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm22240-201ENSMUST00000175225 82 ntBASIC13.43□□□□□ -0.26
Ighv1-52A0A0A6YXC3 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms