Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12d-3A0A075B6A4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12d-3A0A075B6A4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12d-3A0A075B6A4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12d-3A0A075B6A4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12d-3A0A075B6A4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12d-3A0A075B6A4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms