Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav9d-1A0A075B699 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 AV356131-201ENSMUST00000206201 750 ntBASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav9d-1A0A075B699 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9d-1A0A075B699 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav9d-1A0A075B699 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav9d-1A0A075B699 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9d-1A0A075B699 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms