Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16A0A075B653 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav16A0A075B653 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav16A0A075B653 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Mir7075-201ENSMUST00000184187 82 ntBASIC13.7□□□□□ -0.22
Trav16A0A075B653 Gm38205-201ENSMUST00000192243 258 ntBASIC13.7□□□□□ -0.22
Trav16A0A075B653 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.7□□□□□ -0.22
Trav16A0A075B653 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav16A0A075B653 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav16A0A075B653 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.69□□□□□ -0.22
Trav16A0A075B653 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.69□□□□□ -0.22
Trav16A0A075B653 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16A0A075B653 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.68□□□□□ -0.22
Trav16A0A075B653 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16A0A075B653 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms