Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.08■□□□□ 0.01
Trav15d-1-dv6d-1A0A075B624 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Gm13234-201ENSMUST00000120010 747 ntBASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15d-1-dv6d-1A0A075B624 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms