Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav13d-1A0A075B606 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Gm11927-201ENSMUST00000118472 759 ntBASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Gm15378-201ENSMUST00000121894 207 ntBASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav13d-1A0A075B606 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13d-1A0A075B606 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Mir6982-201ENSMUST00000184354 68 ntBASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13d-1A0A075B606 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-1A0A075B606 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-1A0A075B606 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-1A0A075B606 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-1A0A075B606 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-1A0A075B606 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13d-1A0A075B606 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-1A0A075B606 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms